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2022-03-05
摘要翻译:
生物和生物医学成像数据集跨越几个数量级的空间和时间记录生物有机体的构成、结构和动力学。目前,成像技术已广泛应用于生命和生物医学领域,在基础科学中实现对生物机制的发现和理解,在临床试验、动物和人类医学中实现评估、诊断和治疗干预。影像的普遍应用和使用提出了一个重要的问题和机遇:生物和医学影像数据的价值和最终归宿是什么?在过去的几年里,一些信息学和数据科学技术已经足够成熟,因此这些数据集的常规出版现在是可能的。来自15个国家和所有人口大陆的全球生物成像与会者一致认为,需要就建立图像数据储存库及其向全球科学界提供数据所使用的格式提出建议和准则。本白皮书对这些共同的、全球适用的指导方针的标准提出了一个共享的、全球的观点,并提出了开放工具和资源的临时建议,这些工具和资源现在可用,可以为未来的发展提供基础。
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英文标题:
《A Global View of Standards for Open Image Data Formats and Repositories》
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作者:
Jason R. Swedlow, Pasi Kankaanp\"a\"a, Ugis Sarkans, Wojtek Goscinski,
  Graham Galloway, Ryan P. Sullivan, Claire M. Brown, Chris Wood, Antje
  Keppler, Ben Loos, Sara Zullino, Dario Livio Longo, Silvio Aime, Shuichi
  Onami
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最新提交年份:
2020
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分类信息:

一级分类:Quantitative Biology        数量生物学
二级分类:Other Quantitative Biology        其他定量生物学
分类描述:Work in quantitative biology that does not fit into the other q-bio classifications
不适合其他q-bio分类的定量生物学工作
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英文摘要:
  Biological and biomedical imaging datasets record the constitution, architecture and dynamics of living organisms across several orders of magnitude of space and time. Imaging technologies are now used throughout the life and biomedical sciences to achieve discovery and understanding of biological mechanisms in the basic sciences as well as assessment, diagnosis and therapeutic intervention in clinical trials and animal and human medicine. The universal application and use of imaging raises an important question and opportunity: what is the value and ultimate destination of biological and medical imaging data? In the last few years, several informatics and data science technologies have matured sufficiently so that routine publication of these datasets is now possible. Participants in Global BioImaging from 15 countries and all populated continents have agreed on the need for recommendations and guidelines for the establishment of image data repositories and the formats they use for delivering data to the global scientific community. This white paper presents a shared, global view of criteria for these common, globally applicable guidelines and provisional proposals for open tools and resources that are available now and can provide a foundation for future development.
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PDF链接:
https://arxiv.org/pdf/2010.10107
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